Burkholderia pyrrocinia

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Description

Burkholderia pyrrocinia-1.jpg
  • Burkholderia pyrrocinia is the Burkholderia cepacia complex (Bcc) species most frequently associated with roots of crop plants. The endophytic bacterium Burkholderia pyrrocinia strain JK-SH007 isolated from poplar stems plays a highly significant role in the growth promotion and the biocontrol of poplar canker during colonization in poplar[1][2].
  • Common Name: Unknown
  • NCBI Taxonomy

Different Growth Conditions

Internal Control Genes

Gene Symbol Gene Name Application Scope Accession Number Primers (5'-3')
[Forward/Reverse]
Size [bp] Tm [℃] Detection
pyrG[1] CTP synthetase
  • Poplar stem
  • Time, pH, temperature
  • Different concentrations of saline
NA
  • F:AGTCACCCTCCTCAAACTCG
  • R:TCGTGAAGTTGTTGGCCTTG
1170 52 SYBR

Molecular Types

  • mRNA

Evaluation Methods

Contact

  • Name: Jian-Ren Ye
  • Email: jrye@njfu.edu.cn
  • Institution: College of Forestry and Co-Innovation Center for Sustainable Forestry in Southern China, Jiangsu Key Laboratory for Prevention and Management of Invasive Species, Nanjing Forestry University, Nanjing, Jiangsu, China

Citation Statistics

Cited by 1 (Based on Google Scholar [2017-09-01])

References

  1. 1.0 1.1 Wu BY, Ye JR, Huang L, He LM, Li DW. Validation of reference genes for RT-qPCR analysis in Burkholderia pyrrocinia JK-SH007. J Microbiol Methods. 2017 Jan;132:95-98. doi: 10.1016/j.mimet.2016.10.004. Epub 2016 Oct 8. PubMed PMID: 27725176.
  2. Alisi C, Lasinio G J, Dalmastri C, et al. Metabolic profiling of Burkholderia cenocepacia, Burkholderia ambifaria, and Burkholderia pyrrocinia isolates from maize rhizosphere[J]. Microbial ecology, 2005, 50(3): 385-395.

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