Delomys sublineatus
Jump to navigation
Jump to search
Contents
Description
- Delomys sublineatus is listed as Least Concern in view of its wide distribution, presumed large population, and because it is unlikely to be declining at nearly the rate required to qualify for listing in a threatened category; also it occurs in several protected areas and is locally common. a rodent used as indicator species in conservation studies of the endangered Brazilian rainforest, suitable primer sets are more problematic to find than in model species[1][2] .
- Common Name: Pallid atlantic forest rat
- NCBI Taxonomy
Liver Samples
Internal Control Genes
Gene Symbol | Gene Name | Application Scope | Accession Number | Primers (5'-3') [Forward/Reverse] |
Size [bp] | Tm [℃] | Detection |
---|---|---|---|---|---|---|---|
Sdha[1] | Succinate dehydrogenase complex, subunit A |
|
GU361627 |
NA |
152 | 55 | SYBR |
Canx[1] | Calnexin |
|
GU361628 |
NA |
84 | 55 | SYBR |
Pgk1[1] | Phosphoglycerate kinase 1 |
|
GU361632 |
NA |
191 | 55 | SYBR |
Actb[1] | Beta-actin |
|
GU361629 |
NA |
83 | 55 | SYBR |
Actg1[1] | Gamma-actin 1, cytoplasmatic |
|
GU361630 |
NA |
83 | 55 | SYBR |
Molecular Types
- mRNA
Evaluation Methods
- geNorm method && Related Reference
- NormFinder method && Related Reference
- BestKeeper method && Related Reference
Contact
- Name: Simone Sommer
- Email: Sommer@izw-berlin.de
- Institution: Leibniz Institute for Zoo and Wildlife Research (IZW), Evolutionary Genetics, Alfred-Kowalke-Str. 17, 10315 Berlin, Germany
Citation Statistics
Cited by 13 (Based on Google Scholar [2017-09-01])
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Weyrich A, Axtner J, Sommer S. Selection and validation of reference genes for real-time RT-PCR studies in the non-model species Delomys sublineatus, an endemic Brazilian rodent[J]. Biochemical and biophysical research communications, 2010, 392(2): 145-149.
- ↑ Weyrich A, Axtner J, Sommer S.Biochem Biophys Res Commun. 2010 Feb 5;392(2):145-9. doi: 10.1016/j.bbrc.2009.12.173. Epub 2010 Jan 6.PMID: 20059981