Gene:RPS

Synonymous Genes

• RPS <=> rps17, RPS18, RPS9, RPS23, RPS19, RPS5

Applicable Species

Species	Gene Synonymous	Application scenarios	Publication	Year
Anastrepha obliqua	Ribosomal protein S17	Different Developmental Stages	Reference genes for accessing differential expression among developmental stages and analysis of differential expression of OBP genes in Anastrepha obliqua	2016
Apis mellifera	RPS18	Bacterial Challenge	Reference Gene Selection for Insect Expression Studies Using Quantitative Real-Time PCR: The Head of the Honeybee, Apis mellifera, After a Bacterial Challenge	2008
Bubalus bubalis	ribosomal protein S9	Mammary Epithelial Cells	Identification of suitable housekeeping genes for expression analysis in mammary epithelial cells of buffalo (Bubalus bubalis) during lactation cycle	2012
Bubalus bubalis	ribosomal protein S23	Mammary Epithelial Cells	Identification of suitable housekeeping genes for expression analysis in mammary epithelial cells of buffalo (Bubalus bubalis) during lactation cycle	2012
Canis lupus familiaris	Ribosomal protein S5	Different Developmental Stages & Tissues	Selection of internal reference genes for normalization of quantitative reverse transcription polymerase chain reaction (qRT-PCR) analysis in the canine brain and other organs	2013
Canis lupus familiaris	Ribosomal protein S19,	Different Developmental Stages & Tissues	Selection of internal reference genes for normalization of quantitative reverse transcription polymerase chain reaction (qRT-PCR) analysis in the canine brain and other organs	2013
Casuarina glauca	40S ribosomal protein	Different Tissues & Abiotic Stress	Validation of candidate reference genes for qRT-PCR studies in symbiotic and non-symbiotic Casuarina glauca Sieb. ex Spreng. under salinity conditions	2015
Coffea arabica L.	40S ribosomal protein S15	Different Air CO2 Supply & Temperature	Selection and validation of reference genes for accurate RT-qPCR data normalization in Coffea spp. under a climate changes context of interacting elevated CO2 and temperature	2017
Crassostrea gigas	Ribosomal protein S18	Different Developmental Stages	Validation of housekeeping genes as internal controls for studying gene expression during Pacific oyster (Crassostrea gigas) development by quantitative real-time PCR	2013
Cymbidium kanran	RPS3	Abiotic Stress	Evaluation of candidate reference genes for gene expression studies in Cymbidium kanran	2014
Diabrotica virgifera virgifera	ribosomal protein S9	Different Developmental Stages & Tissues	Validation of reference housekeeping genes for gene expression studies in western corn rootworm (Diabrotica virgifera virgifera)	2014
Drosophila melanogaster	Ribosomal protein L32	Physiological Responses	Evaluation of potential reference genes for reverse transcription-qPCR studies of physiological responses in Drosophila melanogaster	2011
Drosophila melanogaster	Ribosomal Protein S20,	Physiological Responses	Evaluation of potential reference genes for reverse transcription-qPCR studies of physiological responses in Drosophila melanogaster	2011
Felis catus	Clone E472 ribosomal protein S7	Snap-Frozen Tissues	A validation of 10 feline reference genes for gene expression measurements in snap-frozen tissues	2007
Helicoverpa armigera	Ribosomal protein S15	Different Biotic and Abiotic conditions	Identification and validation of reference genes for normalization of gene expression analysis using qRT-PCR in Helicoverpa armigera (Lepidoptera: Noctuidae)	2015
Homo sapiens	40S ribosomal protein S23	Breast Cancer	High-throughput identification of reference genes for research and clinical RT-qPCR analysis of breast cancer samples	2013
Homo sapiens	Ribosomal protein S13	Clear Cell Renal Cell Carcinoma	Validation of housekeeping gene and impact on normalized gene expression in clear cell renal cell carcinoma: critical reassessment of YBX3/ZONAB/CSDA expression	2014
Ixodes scapularis	Ribosomal protein S4	Different Feeding Phases	Validation of internal reference genes for real-time quantitative polymerase chain reaction studies in the tick, Ixodes scapularis (Acari: Ixodidae)	2013
Lucilia sericata	40S ribosomal protein S3	Immune Challenge	Selection and Evaluation of Tissue Specific Reference Genes in Lucilia sericata during an Immune Challenge	2015
Macrobrachium olfersii	Ribosomal protein S6 (RpS6)	Different Developmental Stages	Identification and evaluation of reference genes for expression studies by RT-qPCR during embryonic development of the emerging model organism, Macrobrachium olfersii	2016
Musa acuminata	Ribosomal protein S 2	Different Experimental Conditions	Validation of reference genes for RT-qPCR studies of gene expression in banana fruit under different experimental conditions	2011
Nilaparvata lugens	Ribosomal protein S15	Different Experimental Conditions	Selection and Evaluation of Potential Reference Genes for Gene Expression Analysis in the Brown Planthopper, Nilaparvata lugens (Hemiptera: Delphacidae) Using Reverse-Transcription Quantitative PCR	2014
Nilaparvata lugens	Ribosomal protein S11	Different Experimental Conditions	Selection and Evaluation of Potential Reference Genes for Gene Expression Analysis in the Brown Planthopper, Nilaparvata lugens (Hemiptera: Delphacidae) Using Reverse-Transcription Quantitative PCR	2014
Phytophthora parasitica	40S ribosomal protein S3A	Different Developmental Stages	Selection of internal control genes for real-time quantitative RT-PCR assays in the oomycete plant pathogen Phytophthora parasitica	2006
Plutella xylostella	Ribosomal protein S13	Different Developmental Stages & Tissues & Abiotic Stress	Exploring valid reference genes for quantitative real-time PCR analysis in Plutella xylostella (Lepidoptera: Plutellidae)	2013
Plutella xylostella	Ribosomal protein S23	Different Developmental Stages & Tissues & Abiotic Stress	Exploring valid reference genes for quantitative real-time PCR analysis in Plutella xylostella (Lepidoptera: Plutellidae)	2013
Ruditapes philippinarum	40s Ribosomal Protein s20	Copper Treated	Validation of reference genes for RT-qPCR in marine bivalve ecotoxicology: Systematic review and case study using copper treated primary Ruditapes philippinarum hemocytes	2017
Scophthalmus maximus	RNA polynerase II subunit D	Viral Infection	Selection of normalization factors for quantitative real time RT-PCR studies in Japanese flounder (Paralichthys olivaceus) and turbot (Scophthalmus maximus) under conditions of viral infection	2013
Sesamia inferens	Ribosomal protein S13	Different Tissues & Developmental Stages	Exploring valid reference genes for quantitative real-time PCR analysis in Sesamia inferens (Lepidoptera: Noctuidae)	2015
Sesamia inferens	Ribosomal protein S20	Different Tissues & Developmental Stages	Exploring valid reference genes for quantitative real-time PCR analysis in Sesamia inferens (Lepidoptera: Noctuidae)	2015
Spodoptera litura	Ribosomal protein S3	Abiotic & Biotic treatments	Identification and validation of reference genes for gene expression analysis using quantitative PCR in Spodoptera litura (Lepidoptera: Noctuidae)	2013
Stenella coeruleoalba	Ribosomal Protein S18	Striped Dolphin Skin	Selection of reference genes for quantitative RT-PCR studies in striped dolphin (Stenella coeruleoalba) skin biopsies	2006
Symbiodinium	Ribosomal protein S4	Abiotic Stress	Validation of housekeeping genes for gene expression studies in Symbiodinium exposed to thermal and light stress	2011
Tribolium castaneum	Ribosomal protein S18	Fungal Challenge	Evaluation of quantitative PCR reference genes for gene expression studies in Tribolium castaneum after fungal challenge	2010
Tribolium castaneum	Ribosomal protein S3	Fungal Challenge	Evaluation of quantitative PCR reference genes for gene expression studies in Tribolium castaneum after fungal challenge	2010
Pecten maximus	40S ribosomal protein SA	Different Tissues	Selection of reference genes for quantitative RT-PCR studies on the gonad of the bivalve mollusc Pecten maximus L	2012

Featured Sequence

The Sequence of Homo sapiens RPS is displayed as example. 000001 GGGGTCCTTG GCTGGGCGGG GCTTGCTCGC GGTGGCTTGT GGCTCCTTCC TGCGGTGCTT CTCTCTTTCG 000070 000071 CTCAGGCCCG TGGCGCCGAC AGGATGGGCA AGTGTCGTGG ACTTCGTACT GCTAGGAAGC TCCGTAGTCA 000140 000141 CCGACGAGAC CAGAAGTGGC ATGATAAACA GTATAAGAAA GCTCATTTGG GCACAGCCCT AAAGGCCAAC 000210 000211 CCTTTTGGAG GTGCTTCTCA TGCAAAAGGA ATCGTGCTGG AAAAAGTAGG AGTTGAAGCC AAACAGCCAA 000280 000281 ATTCTGCCAT TAGGAAGTGT GTAAGGGTCC AGCTGATCAA GAATGGCAAG AAAATCACAG CCTTTGTACC 000350 000351 CAATGACGGT TGCTTGAACT TTATTGAGGA AAATGATGAA GTTCTGGTTG CTGGATTTGG TCGCAAAGGT 000420 000421 CATGCTGTTG GTGATATTCC TGGAGTCCGC TTTAAGGTTG TCAAAGTAGC CAATGTTTCT CTTTTGGCCC 000490 000491 TATACAAAGG CAAGAAGGAA AGACCAAGAT CATAAATATT AATGGTGAAA ACACTGTAGT AATAAATTTT 000560 000561 CATATGCCAA AAAATGTTTG TATCTTACTG TCCCCTGTTC TCACCACGAA GATCATGTTC ATTACCACCA 000630 000631 CCACCCCCCC TTATTTTTTT TATCCTAAAC CAGCAAACGC AGGACCTGTA CCAATTTTAG GAGACAATAA 000700 000701 GACAGGGTTG TTTCAGGATT CTCTAGAGTT AATAACATTT GTAACCTGGC ACAGTTTCCC TCATCCTGTG 000770 000771 GAATAAGAAA ATGGGATAGA TCTGGAATAA ATGTGCAGTA TTGTAGTATT ACTTTAAGAA CTTTAAGGGA 000840 000841 ACTTCAAAAA CTCACTGAAA TTCTAGTGAG ATACTTTCTT TTTTATTCTT GGTATTTTCC ATATCGGGTG 000910 000911 CAACACTTCA GTTACCAAAT TTCATTGCAC ATAGATTATC TTAGGTACCC TTGGAAATGC ACATTCTTGT 000980 000981 ATCCATCTTA CAGGGGCCCA AGATGATAAA TAGTAAACTC AAAATTGCTC CCCACTCTGT TTATTATTTA 001050 001051 AAGGTGTCAG GATCTGTGTT GTAATGTGTC TACATTAATG TGTTTAGGAG AATACAGGCA TTGGATCATT 001120 001121 TAGTTGATGG AAGTATATGC CAGGCAAGGG AGATAAGGTA TACGACAAGA CTGATGTTTT CAGTATCTTC 001190 001191 TCATGAGGTT GTCAGAGACC TTCATGTCTT CAAAGACTAG TCAGCAAATG AAGTGGTTTA GTGTAGAGAC 001260 001261 AAGATTGGTT GTGTTTTGAT AATTTAAGCT AGGTATTGAG TACATGTGGA TTTTGCTGTC CACAAATACT 001330 001331 TGTTTCAGAG TTTTCATGGA TACAGTGGCA TGGTTGAAAT GAAGCTGTGA GCCTTCTGCT TTAAATCTGA 001400 001401 TGTAAGAAAC TCCTGTTAAC AAATAGTAAG TATGGGTTAA TTAGCCCTTT GATCAAAGCC TAGCTTTACA 001470 001471 TTGTTTAGGA TCTTTGGAAA ACAATTGGTT TGGTTGCCCA CTTTCCGTAG GATCAAGAGC AGAACCTTTC 001540 001541 ACATGGCACA GAAGAACCCA GGTTGCGCTT CATACCTGCA TATTCCAGCC TTAGCCTGCC ATTTCTCTCC 001610 001611 TTGGCACTTT GTGCTCCAGC AACACTGGTC TCAGTTGGTC ATCCTCAAAC TTGGGTTCCA TATCCAGCCT 001680 001681 CAGGACCTCT GTTCCTGTTA CTATGGTTCC TTGCATGTCG CCTGCTCTTA CTAAAGAGCT CGTGTGTTTT 001750 001751 CCAGCACACT TCGGTTTATC TCTTGATGAT GATGCTAGTC TCTCCCTCCG CAAGGGCGGA AAGGCTGCCT 001820 001821 GTTGGTTTGT ACCAGTGTTT CCTAACGTGT AGCTGCAGTC AGTATTTGGC TAAGCTGTTC CCAGGGGCTC 001890 001891 AACAGATGCT TTCGGATGAG CCTTAACTGA CCCAATCCTT TGTGATGCGG GAGAGATTGC TAGGCCTCGC 001960 001961 TCACCTGGCC AGAACCAGGG AAAGAGGCCG CGGTTGCAGC GCGATTCCAG GCCCTGGGCG TCAGGCGCGG 002030 002031 GGTGGGCAGC TCTCCCCGGG CGGTGGGGCC CTTGTGACCG CGAGGCGGGG CGCACCAGGA AGGGAGTGGG 002100 002101 ACAGCGCGGG CGCCCAGGGA TGTGGCCTGG TTACCTGCCT TCTCTGATAC GTCAAGACAC CTTCAACAAT 002170 002171 GGCTTGCAGC TGTACCCTGT TGGCTGCACC CAGGACGCCC TTTTCACTGC TAAGCAGTCC TACCTGAGGC 002240 002241 CCAGGGGCTG CCAGATTGAC CCATAAATAA TCTCCGGCGC CTCAGATCCA GAAGCTGCTG AGCCTGATCT 002310 002311 TAGTGCCTTC TCCTTTCTCT GTGTGGCCCC CCAGCCCCTT TCCCCACTGC CTTGTGTCCA AGGCCCTTTC 002380 002381 CTTCATGTAT CCATGGAGGA GAGACAAAAA TACACATCAA TAAAATAAGA TAGGGAATCC ATAAATAGAC 002450 002451 ATTCAGAAGT ATGGCCAACG GATTTATCTT AAAACCAATG GAGGAAGAAG AGTTTCAATA AATGTTGTGG 002520 002521 ACTTCCATTT GTCAAAGACC AAAACAAAGG AACCCCAACC TTACATGTAA TACAAACTTA ACTCAAAATG 002590 002591 GATCATATAT CTAAATGTAA AATGGAAAGC TATAAAACTG AAAACAGACT ATCTTTACAA CCTAGGCGTA 002660 002661 GGTATAGTTT TTAGACATTA CACCAAAAGC ACATGCCGTA AAAGAAAAAA TAGATAAATT GGTGGATTTC 002730 002731 ATTAAAATTA AAAAACTTTT TCTCTCTGAA AAATCCTGTT AAGCTGGGCG CTGTGGTTCA TGCCTGTAAT 002800 002801 CCCAGCACTT TGGGAGGCTG AGTTGGGAAG AAATTAATAG CTTGAGGCCA GGAGTTCAAG ATCATCCTGG 002870 002871 GCAGCAAAGT CATACACTCT TGAGGGAAGA GAGAGACCTT CTCATATTGT TTTATATTGT TTTATACTCA 002940 002941 GTACCTGTTT TAAGAAAAAA ACAAGGAAGT GAAATCAAAG ACAGGCAGCC CGGCACCAGG CCTGAAACCA 003010 003011 GCCCTGGGCC TGCCTGGCCT AAACCTAGTA GTTAAAAATC AACTTACGAC TTAGAACCTG ATGTTATCCG 003080 003081 TAGATTCCAA GCATTGTATA AAAAAATTGT GAAACTCCCT GTTGTGTTCT GTACCAGTGC ATGAAACCCC 003150 003151 TGTCACATAT CCCCTAGATT GCTCAATCAA TCACGACCCT TTCATGTGAA ATCTTTAGTG TTGTGAGCCC 003220 003221 TTAAAAGGGA CAGAAATTGT GCACTTGAGG AGCTCAGATT TTAAGGCTGT AGCTTGCCGA TGCTCCCAGC 003290 003291 TGAATAAAGC CCTTCCTTCT ACAAAAAAAA AAAAA

Conserved Domains

The Conserved domains of Homo sapiens RPS is displayed as example.

External Links

• NCBI Conserved Protein Domain Family
• WikiPedia
• Pfam