Difference between revisions of "Phytophthora parasitica"

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=='''''Different Developmental Stages'''''==
 
=='''''Different Developmental Stages'''''==
===Reference Genes===
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===Internal Control Genes===
 
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|align="center"| SYBR
 
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===Molecular Types===
 
===Molecular Types===
 
* mRNA
 
* mRNA

Revision as of 02:46, 8 August 2017

Description

Phytophthora parasitica.png
  • Phytophthora parasitica, a kind of oomycete that represents most species in the genus Phytophthora. It is a soilborne pathogen that causes destructive diseases of a wide variety of crop plants including tomato, pepper, potato, tobacco, cacao, banana, citrus, walnut, almond, a wide variety of nursery and ornamental plants, and forest ecosystems[1][2].
  • Common Name: NA
  • NCBI Taxonomy

Different Developmental Stages

Internal Control Genes

Gene Symbol Gene Name Application Scope Accession Number Primers (5'-3')
[Forward/Reverse]
Size [bp] Tm [℃] Detection
Ubc[1] Ubiquitin-conjugating enzyme
  • Asexual stage
  • Sexual reproduction
  • Stage of pathogenesis
CK859493
  • F:CCACTTAGAGCACGCTAGGA
  • R:TACCGACTGTCCTTCGTTCA
152 60 SYBR
WS21[1] 40S ribosomal protein S3A
  • Asexual stage
  • Stage of pathogenesis
CF891675
  • F:CTCCAGAACGTGTACATCCG
  • R:TAGCGCCCTTCTCCTCAG
106 60 SYBR
Tub-b[1] β-tubulin
  • Asexual stage
  • Sexual reproduction
AY564081
  • F:AGGAGATGTTCAAGCGTGTG
  • R:GATCGTTCATGTTGGACTCG
129 60 SYBR

Molecular Types

  • mRNA

Evaluation Methods

Contact

  • Name: Ruey-Fen Liou
  • Email: rfliou@ntu.edu.tw
  • Institution: Department of Plant Pathology and Microbiology, National Taiwan University, Taipei 106, Taiwan

Citation Statistics

Cited by 111 (Based on Google Scholar [2017-06-16])

References

  1. 1.0 1.1 1.2 1.3 Yan H Z, Liou R F. Selection of internal control genes for real-time quantitative RT-PCR assays in the oomycete plant pathogen Phytophthora parasitica[J]. Fungal Genetics and Biology, 2006, 43(6): 430-438.
  2. Meng Y, Zhang Q, Ding W, Shan W. Phytophthora parasitica: a model oomycete plant pathogen. Mycology. 2014 Jun;5(2):43-51. Epub 2014 May 19. Review. PubMed PMID: 24999436; PubMed Central PMCID: PMC4066925.

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